STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDGFRLPlatelet derived growth factor receptor like. (375 aa)    
Predicted Functional Partners:
ENSOPRP00000007052
annotation not available
    
 0.876
VEGFC
Vascular endothelial growth factor C.
    
 0.803
GRB2
Growth factor receptor bound protein 2.
    
 0.797
VEGFB
Vascular endothelial growth factor B.
    
 0.793
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 0.784
ENSOPRP00000014568
annotation not available
    
 0.784
ENSOPRP00000006638
annotation not available
    
 0.762
CDH5
Cadherin 5.
   
 0.741
NRP1
Neuropilin 1.
    
 0.740
PLCG1
Phospholipase C gamma 1.
    
 0.738
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.