STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL52Mitochondrial ribosomal protein L52. (125 aa)    
Predicted Functional Partners:
ENSOPRP00000013777
annotation not available
   
 
 0.978
MRPS16
Mitochondrial ribosomal protein S16.
   
   0.972
MRPL24
Mitochondrial ribosomal protein L24.
   
 
 0.967
ENSOPRP00000012196
annotation not available
    
 
 0.966
ENSOPRP00000006713
annotation not available
   
 
 0.955
MRPL38
Mitochondrial ribosomal protein L38.
    
 
 0.954
ENSOPRP00000006559
annotation not available
   
 
 0.953
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.953
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.952
MRPL42
Mitochondrial ribosomal protein L42.
   
 
 0.951
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.