STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000001002annotation not available (852 aa)    
Predicted Functional Partners:
ENSOPRP00000012545
annotation not available
   
 0.986
MTREX
Mtr4 exosome RNA helicase.
   
 0.971
RBM28
RNA binding motif protein 28.
   
  
 0.942
UBXN1
UBX domain protein 1.
    
 0.930
ENSOPRP00000000266
annotation not available
  
 
 0.913
NOM1
Nucleolar protein with MIF4G domain 1.
   
    0.913
ENSOPRP00000010380
annotation not available
   
 
 0.907
NOC3L
NOC3 like DNA replication regulator.
   
  
 0.899
GNL2
G protein nucleolar 2.
   
 
 0.891
GTPBP4
GTP binding protein 4.
   
 
 0.884
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.