STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000002011annotation not available (272 aa)    
Predicted Functional Partners:
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.992
ENSOPRP00000013883
annotation not available
    
 0.991
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.990
FANCM
FA complementation group M.
    
 0.990
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.988
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.983
GTF2H1
General transcription factor IIH subunit 1.
    
 0.981
RPA1
Replication protein A1.
    
 0.964
ENSOPRP00000000800
annotation not available
   
 0.963
ENSOPRP00000014646
annotation not available
    
 0.956
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.