STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEF1Sperm flagellar 1. (196 aa)    
Predicted Functional Partners:
CFAP70
Cilia and flagella associated protein 70.
   
 0.768
PLA2G4A
Phospholipase A2 group IVA.
    
 0.685
ENSOPRP00000013364
annotation not available
     
 0.629
ENSOPRP00000011027
annotation not available
   
 0.611
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.597
ENSOPRP00000009440
annotation not available
   
 0.584
RHOT1
Ras homolog family member T1.
   
 0.584
SPEF2
Sperm flagellar 2.
    
 
 0.574
RXFP1
Relaxin family peptide receptor 1.
     
 0.553
ENSOPRP00000006269
annotation not available
   
 
 0.536
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.