STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000002486annotation not available (805 aa)    
Predicted Functional Partners:
TARS1
threonyl-tRNA synthetase 1.
  
 
 
0.903
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.878
LARS1
leucyl-tRNA synthetase 1.
  
 
 0.869
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.858
TARS2
threonyl-tRNA synthetase 2, mitochondrial.
  
 
 
0.857
MTIF2
Mitochondrial translational initiation factor 2.
  
 0.811
ENSOPRP00000003698
annotation not available
   
 
 0.802
MRPL22
Mitochondrial ribosomal protein L22.
   
 
 0.799
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.781
MRPS15
Mitochondrial ribosomal protein S15.
  
 
 0.775
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.