STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBD1Tubulin delta 1. (453 aa)    
Predicted Functional Partners:
TUBGCP2
Tubulin gamma complex associated protein 2.
   
 0.961
TUBGCP4
Tubulin gamma complex associated protein 4.
    
 0.941
TUBGCP5
Tubulin gamma complex associated protein 5.
    
 0.931
ENSOPRP00000002875
annotation not available
   
 0.900
ENSOPRP00000005473
annotation not available
   
 0.900
ENSOPRP00000000208
annotation not available
    
 0.869
ENSOPRP00000003429
annotation not available
   
 0.731
TECPR1
Tectonin beta-propeller repeat containing 1.
   
 0.731
DNMT1
DNA methyltransferase 1.
   
 0.731
RBM48
RNA binding motif protein 48.
   
 0.731
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.