STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK1VRK serine/threonine kinase 1. (395 aa)    
Predicted Functional Partners:
ENSOPRP00000001069
annotation not available
    
 0.883
ANKLE2
Ankyrin repeat and LEM domain containing 2.
   
 0.851
BANF1
Barrier to autointegration factor 1.
    
 0.836
BYSL
Bystin like.
    
 0.833
ENSOPRP00000014462
annotation not available
    
 0.829
BANF2
Barrier to autointegration factor 2.
    
 0.804
ENSOPRP00000000556
annotation not available
    
 0.785
ENSOPRP00000014432
annotation not available
    
 0.782
PER1
Period circadian regulator 1.
    
 0.782
ENSOPRP00000008576
annotation not available
    
 0.759
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.