STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAG4Sperm associated antigen 4. (437 aa)    
Predicted Functional Partners:
ODF1
Outer dense fiber of sperm tails 1.
  
 
 0.805
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 0.757
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
    
 0.747
LMNB1
Lamin B1.
    
 0.633
LMNA
Lamin A/C.
    
 0.619
ENSOPRP00000007481
annotation not available
    
 0.601
ENSOPRP00000005040
annotation not available
    
 
 0.592
RDH8
Retinol dehydrogenase 8.
    
 
 0.583
ENSOPRP00000011049
annotation not available
    
 
 0.583
DHRS7C
Dehydrogenase/reductase 7C.
    
 
 0.583
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.