STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSDL2Hydroxysteroid dehydrogenase like 2. (416 aa)    
Predicted Functional Partners:
PEX5
Peroxisomal biogenesis factor 5.
   
 0.991
PEX5L
Peroxisomal biogenesis factor 5 like.
   
 0.991
ENSOPRP00000003499
annotation not available
    
 0.978
ENSOPRP00000015864
annotation not available
    
 0.978
ENSOPRP00000016347
annotation not available
    
 0.978
ENSOPRP00000009554
annotation not available
    
  0.976
PEX12
Peroxisomal biogenesis factor 12.
   
 0.976
PEX13
Peroxisomal biogenesis factor 13.
   
 
 0.975
ENSOPRP00000007735
annotation not available
     
 0.974
ECI2
enoyl-CoA delta isomerase 2.
  
 0.973
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.