STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL4Tubulin tyrosine ligase like 4. (1192 aa)    
Predicted Functional Partners:
ENSOPRP00000011296
annotation not available
    
 
 0.690
ENSOPRP00000000036
annotation not available
    
 
 0.572
TTLL12
Tubulin tyrosine ligase like 12.
      
0.551
ENSOPRP00000011031
annotation not available
      
0.546
ENSOPRP00000014053
annotation not available
    
 
 0.531
AGBL2
ATP/GTP binding protein like 2.
    
 
 0.522
ENSOPRP00000011621
annotation not available
   
  
0.519
AGBL5
ATP/GTP binding protein like 5.
    
 
 0.434
USP35
Ubiquitin specific peptidase 35.
      
 0.416
ATAT1
Alpha tubulin acetyltransferase 1.
      
 0.414
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.