STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF84Zinc finger protein 84. (731 aa)    
Predicted Functional Partners:
ENSOPRP00000009228
annotation not available
    
  0.775
ENSOPRP00000011569
annotation not available
    
  0.546
ENSOPRP00000011603
annotation not available
    
  0.546
BARD1
BRCA1 associated RING domain 1.
    
  0.527
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.520
NME8
NME/NM23 family member 8.
    
 0.510
ENSOPRP00000001880
annotation not available
    
 0.502
MRPS10
Mitochondrial ribosomal protein S10.
   
  0.491
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.488
MRPS5
Mitochondrial ribosomal protein S5.
    
  0.485
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.