STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM43RNA binding motif protein 43. (348 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin.
    
 0.653
RPA2
Replication protein A2.
    
 0.653
STN1
STN1 subunit of CST complex.
    
 0.653
SASS6
SAS-6 centriolar assembly protein.
    
 0.653
KPNB1
Karyopherin subunit beta 1.
    
   0.567
IQSEC3
IQ motif and Sec7 domain ArfGEF 3.
      
 0.518
PARP9
poly(ADP-ribose) polymerase family member 9.
   
 
 0.480
CD8A
CD8a molecule.
     
 0.473
ZC3HAV1L
Zinc finger CCCH-type containing, antiviral 1 like.
    
 
 0.470
ENSOPRP00000001115
annotation not available
   
 0.454
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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