STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000007397annotation not available (378 aa)    
Predicted Functional Partners:
IFT81
Intraflagellar transport 81.
    
 0.662
MARS1
methionyl-tRNA synthetase 1.
   
 0.632
ENSOPRP00000006262
annotation not available
    
 0.629
IFT88
Intraflagellar transport 88.
   
 0.614
ENSOPRP00000001910
annotation not available
    
 0.607
ENSOPRP00000002351
annotation not available
    
 0.600
ENSOPRP00000013733
annotation not available
    
 0.592
IFT80
Intraflagellar transport 80.
    
 0.590
IFT57
Intraflagellar transport 57.
    
 0.587
IFT172
Intraflagellar transport 172.
    
 0.586
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.