STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KATNB1Katanin regulatory subunit B1. (655 aa)    
Predicted Functional Partners:
ENSOPRP00000008337
annotation not available
   
 
 0.975
KATNAL1
Katanin catalytic subunit A1 like 1.
   
 
 0.967
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 
 0.939
KATNBL1
Katanin regulatory subunit B1 like 1.
    
 
0.747
PSMC5
Proteasome 26S subunit, ATPase 5.
   
 
 0.689
ENSOPRP00000001254
annotation not available
    
 
 0.679
ENSOPRP00000004601
annotation not available
    
 
 0.679
PSMC2
Proteasome 26S subunit, ATPase 2.
    
 
 0.679
ENSOPRP00000006297
annotation not available
    
 
 0.679
FGGY
FGGY carbohydrate kinase domain containing.
    
 
 0.679
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.