STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLCB4Phospholipase C beta 4. (1165 aa)    
Predicted Functional Partners:
PATJ
PATJ crumbs cell polarity complex component.
   
  0.931
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.885
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.878
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.878
ENSOPRP00000010393
annotation not available
   
 0.864
DGKQ
Diacylglycerol kinase theta.
     
 0.862
GNAT3
G protein subunit alpha transducin 3.
   
 0.857
ENSOPRP00000008089
annotation not available
   
 
 0.855
GNA14
G protein subunit alpha 14.
    
 0.854
GNAQ
G protein subunit alpha q.
    
 0.854
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.