STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBSPONSomatomedin B and thrombospondin type 1 domain containing. (153 aa)    
Predicted Functional Partners:
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 0.943
NUP93
Nucleoporin 93.
   
 0.917
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.890
ENSOPRP00000011231
annotation not available
  
 
 0.860
ENSOPRP00000010975
annotation not available
  
 0.858
ENSOPRP00000011012
annotation not available
  
 0.858
MED23
Mediator complex subunit 23.
    
 0.854
ENSOPRP00000007741
annotation not available
    
 0.846
MED15
Mediator complex subunit 15.
   
 0.846
ENSOPRP00000013920
annotation not available
    
 0.835
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.