STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000009065annotation not available (157 aa)    
Predicted Functional Partners:
MCM6
Minichromosome maintenance complex component 6.
   
 0.831
SPOP
Speckle type BTB/POZ protein.
    
   0.823
CDC6
Cell division cycle 6.
   
 
 0.782
ENSOPRP00000009241
annotation not available
   
 0.769
ENSOPRP00000003893
annotation not available
   
 
 0.749
ENSOPRP00000011791
annotation not available
   
 
 0.728
ORC4
Origin recognition complex subunit 4.
     
 0.724
CDC20
Cell division cycle 20.
   
 0.721
ORC1
Origin recognition complex subunit 1.
   
 
 0.721
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.719
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.