STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB13Homeobox B13. (284 aa)    
Predicted Functional Partners:
TEAD4
TEA domain transcription factor 4.
    
   0.675
ENSOPRP00000008912
annotation not available
    
 
 0.665
MEIS1
Meis homeobox 1.
    
 
 0.665
ENSOPRP00000015873
annotation not available
    
 
 0.665
PBX2
PBX homeobox 2.
    
 
 0.593
ENSOPRP00000005920
annotation not available
    
 
 0.593
ENSOPRP00000006358
annotation not available
    
 
 0.593
HOXC6
Homeobox C6.
    
 
0.484
PRRX2
Paired related homeobox 2.
    
 
 0.452
HOXD8
Homeobox D8.
    
 
0.424
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.