STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000009680annotation not available (168 aa)    
Predicted Functional Partners:
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.992
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
   
 0.990
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.989
ENSOPRP00000010610
annotation not available
   
 0.987
ENSOPRP00000014072
annotation not available
   
 0.987
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.982
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.981
SF3B1
Splicing factor 3b subunit 1.
   
 0.979
SF3B4
Splicing factor 3b subunit 4.
   
 0.968
ENSOPRP00000006325
annotation not available
   
 0.962
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.