STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPT1ACarnitine palmitoyltransferase 1A. (761 aa)    
Predicted Functional Partners:
ACSL1
acyl-CoA synthetase long chain family member 1.
     
 0.919
ACSL3
acyl-CoA synthetase long chain family member 3.
   
 
 0.910
ACSL5
acyl-CoA synthetase long chain family member 5.
     
 0.909
ACACB
acetyl-CoA carboxylase beta.
     
 0.908
ENSOPRP00000010598
annotation not available
     
 0.899
CPT2
Carnitine palmitoyltransferase 2.
  
 
0.871
CPT1B
Carnitine palmitoyltransferase 1B.
  
  
0.851
CPT1C
Carnitine palmitoyltransferase 1C.
  
  
 
0.837
ACACA
acetyl-CoA carboxylase alpha.
     
 0.758
ENSOPRP00000000396
annotation not available
     
 0.680
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.