STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000011140annotation not available (325 aa)    
Predicted Functional Partners:
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
 
 0.793
ATP5F1B
ATP synthase F1 subunit beta.
    
 
 0.749
ATP5F1A
ATP synthase F1 subunit alpha.
    
 
 0.683
ENSOPRP00000006256
annotation not available
    
 
 0.674
ATP5F1C
ATP synthase F1 subunit gamma.
   
  
 0.609
PUM1
Pumilio RNA binding family member 1.
    
 
 0.558
PUM2
Pumilio RNA binding family member 2.
    
 
 0.558
PDHB
Pyruvate dehydrogenase E1 beta subunit.
   
   0.470
ENSOPRP00000015312
annotation not available
   
  
 0.454
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 
 0.451
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.