STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOPRP00000011846annotation not available (305 aa)    
Predicted Functional Partners:
WDR46
WD repeat domain 46.
   
 0.999
ENSOPRP00000005091
annotation not available
   
 0.999
UTP4
UTP4 small subunit processome component.
   
 0.999
ENSOPRP00000008245
annotation not available
   
  0.999
ENSOPRP00000008479
annotation not available
   
 0.999
PDCD11
Programmed cell death 11.
   
 0.999
UTP20
UTP20 small subunit processome component.
   
 0.999
KRR1
KRR1 small subunit processome component homolog.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.999
WDR43
WD repeat domain 43.
   
 0.998
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.