STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL11ABAF chromatin remodeling complex subunit BCL11A. (835 aa)    
Predicted Functional Partners:
ENSOPRP00000009228
annotation not available
    
  0.775
ENSOPRP00000004083
annotation not available
    
 0.648
ENSOPRP00000011569
annotation not available
    
  0.546
ENSOPRP00000011603
annotation not available
    
  0.546
BARD1
BRCA1 associated RING domain 1.
    
  0.527
NME8
NME/NM23 family member 8.
    
 0.510
KDM6B
Lysine demethylase 6B.
   
 0.500
MRPS5
Mitochondrial ribosomal protein S5.
    
  0.485
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.484
ENSOPRP00000013319
annotation not available
    
 0.484
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.