STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAT6ALysine acetyltransferase 6A. (1992 aa)    
Predicted Functional Partners:
MEAF6
MYST/Esa1 associated factor 6.
    
 0.950
BRPF1
Bromodomain and PHD finger containing 1.
    
 0.920
TRRAP
Transformation/transcription domain associated protein.
   
 0.911
EP300
E1A binding protein p300.
   
 0.907
ENSOPRP00000013751
annotation not available
   
 0.894
RUVBL1
RuvB like AAA ATPase 1.
   
 0.891
ENSOPRP00000002424
annotation not available
   
 0.887
ENSOPRP00000006616
annotation not available
    
 0.868
BRPF3
Bromodomain and PHD finger containing 3.
   
 0.866
MORF4L1
Mortality factor 4 like 1.
    
 0.861
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.