STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMID1EMI domain containing 1. (440 aa)    
Predicted Functional Partners:
SERPINH1
Serpin family H member 1.
    
 0.656
TEP1
Telomerase associated protein 1.
    
 0.643
COL25A1
Collagen type XXV alpha 1 chain.
     
 0.618
C1QC
Complement C1q C chain.
    
  0.559
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.519
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.519
FURIN
Furin, paired basic amino acid cleaving enzyme.
    
  0.518
ENSOPRP00000015098
annotation not available
    
  0.518
TAF12
TATA-box binding protein associated factor 12.
    
 0.512
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
    
  0.499
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.