STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA5Integrin subunit alpha 5. (1054 aa)    
Predicted Functional Partners:
ITGB1
Integrin subunit beta 1.
   
 0.996
ENSOPRP00000006279
annotation not available
   
 0.967
ENSOPRP00000014223
annotation not available
   
 0.964
ITGB5
Integrin subunit beta 5.
   
 0.951
ITGB6
Integrin subunit beta 6.
   
 0.943
ENSOPRP00000002345
annotation not available
   
 0.941
VTN
Vitronectin.
    
 0.927
LAMB1
Laminin subunit beta 1.
    
 0.920
ENSOPRP00000010580
annotation not available
    
 0.916
PTK2
Protein tyrosine kinase 2.
   
 0.913
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.