STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNPLA6Patatin like phospholipase domain containing 6. (1105 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2 group IVA.
   
 
 0.895
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
    
 0.889
XPR1
Xenotropic and polytropic retrovirus receptor 1.
     
 0.886
NUDT12
Nudix hydrolase 12.
  
 0.881
PLA2G15
Phospholipase A2 group XV.
     
 0.879
LCAT
Lecithin-cholesterol acyltransferase.
     
 0.879
ENSOPRP00000012932
annotation not available
   
 0.872
ENSOPRP00000001060
annotation not available
   
 
 0.861
PLAAT1
Phospholipase A and acyltransferase 1.
   
 0.861
PLA2G6
Phospholipase A2 group VI.
   
 
 0.860
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.