STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC7BTetratricopeptide repeat domain 7B. (802 aa)    
Predicted Functional Partners:
PI4KA
Phosphatidylinositol 4-kinase alpha.
    
 
 0.963
FAM126A
Family with sequence similarity 126 member A.
    
 
 0.960
EFR3B
EFR3 homolog B.
   
 
 0.810
ENSOPRP00000014212
annotation not available
   
 
 0.718
FAM126B
Family with sequence similarity 126 member B.
    
 
 0.683
ENSOPRP00000006394
annotation not available
      
 0.618
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.618
ENSOPRP00000002598
annotation not available
      
 0.615
QPCTL
Glutaminyl-peptide cyclotransferase like.
      
 0.614
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.576
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.