STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIY52675.1TraG family conjugation system ATPase. (684 aa)    
Predicted Functional Partners:
EIY52676.1
Hypothetical protein.
 
     0.891
EIY52677.1
Hypothetical protein.
 
   
 0.874
EIY52673.1
Conjugative transposon TraJ protein.
 
   
 0.865
EIY52671.1
Conjugative transposon TraK protein.
 
 
 0.863
EIY52674.1
Hypothetical protein.
 
     0.846
EIY52667.1
Conjugative transposon TraN protein.
 
   
 0.823
EIY52668.1
Conjugative transposon TraM protein.
 
     0.820
EIY53812.1
Conjugative transposon TraK protein.
 
 
 0.804
EIY49755.1
Conjugative transposon TraK protein.
 
 
 0.804
EIY47510.1
Conjugative transposon TraK protein.
 
 
 0.804
Your Current Organism:
Bacteroides nordii
NCBI taxonomy Id: 997884
Other names: B. nordii CL02T12C05, Bacteroides nordii CL02T12C05, Bacteroides nordii str. CL02T12C05, Bacteroides nordii strain CL02T12C05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.