Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001037annotation not available (556 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
   0.744
ENSSDAP00000008146
annotation not available
    
 0.726
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.726
ENSSDAP00000005766
annotation not available
    
 
 0.607
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.543
RXFP1
Relaxin family peptide receptor 1.
    
 0.543
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.543
RXFP2
Relaxin family peptide receptor 2.
    
 0.543
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
  0.536
CCDC197
Coiled-coil domain containing 197.
    
  0.536
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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