Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOR1BTorsin family 1 member B. (315 aa)    
Predicted Functional Partners:
TOR1A
Torsin family 1 member A.
   
 0.990
TOR1AIP2
Torsin 1A interacting protein 2.
    
 
 0.865
TOR2A
Torsin family 2 member A.
   
   0.852
TOR1AIP1
Torsin 1A interacting protein 1.
    
 
 0.809
NAGLU
N-acetyl-alpha-glucosaminidase.
    
   0.801
ENSSDAP00000012101
annotation not available
   
   0.768
ENSSDAP00000015000
annotation not available
   
   0.768
CANX
Calnexin.
    
 
 0.759
DNAJC3
DnaJ heat shock protein family (Hsp40) member C3.
    
 
 0.725
STON2
Stonin 2.
    
  0.725
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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