Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001047annotation not available (127 aa)    
Predicted Functional Partners:
NBR1
NBR1 autophagy cargo receptor.
    
 0.753
HGF
Hepatocyte growth factor.
    
   0.727
PPIB
Peptidylprolyl isomerase B.
  
 0.717
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 
 0.688
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.682
PPIC
Peptidylprolyl isomerase C.
  
 0.681
FKBP1B
FKBP prolyl isomerase 1B.
  
 
 0.634
ENSSDAP00000026827
annotation not available
  
 
 0.631
ENSSDAP00000026894
annotation not available
  
 
 0.624
ENSSDAP00000005388
annotation not available
  
 
 0.622
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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