Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001064annotation not available (93 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.950
ENSSDAP00000013185
annotation not available
   
 0.950
RPL8
Ribosomal protein L8.
  
 0.928
RPL11
Ribosomal protein L11.
  
 0.927
ENSSDAP00000018352
annotation not available
   
 0.925
RPLP2
Ribosomal protein lateral stalk subunit P2.
   
 0.921
RPL19
Ribosomal protein L19.
   
 0.920
RPL13
Ribosomal protein L13.
  
 0.915
ENSSDAP00000017858
annotation not available
   
 0.899
ENSSDAP00000008146
annotation not available
   
 0.893
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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