Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OMA1OMA1 zinc metallopeptidase. (526 aa)    
Predicted Functional Partners:
YME1L1
YME1 like 1 ATPase.
  
 0.987
DELE1
DAP3 binding cell death enhancer 1.
  
 
 0.983
ENSSDAP00000006111
annotation not available
   
 0.960
OPA1
OPA1 mitochondrial dynamin like GTPase.
   
 0.960
ENSSDAP00000005715
annotation not available
  
 0.905
RCE1
Ras converting CAAX endopeptidase 1.
    
 0.903
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.856
ENSSDAP00000014372
annotation not available
    
 
 0.814
MFN2
Mitofusin 2.
   
 0.797
DNM1L
Dynamin 1 like.
   
 0.778
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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