Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBAC1UBA domain containing 1. (383 aa)    
Predicted Functional Partners:
RNF123
Ring finger protein 123.
   
 
 0.984
USP48
Ubiquitin specific peptidase 48.
    
   0.911
TRIM2
Tripartite motif containing 2.
    
   0.910
ENSSDAP00000004379
annotation not available
    
  0.907
RPS27A
Ribosomal protein S27a.
    
  0.907
ENSSDAP00000016414
annotation not available
    
  0.907
UTP6
UTP6 small subunit processome component.
    
   0.895
ELAC2
elaC ribonuclease Z 2.
    
   0.882
BVES
Blood vessel epicardial substance.
    
   0.846
TWF2
Twinfilin actin binding protein 2.
    
 
 0.832
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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