Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEAF1DEAF1 transcription factor. (499 aa)    
Predicted Functional Partners:
ENSSDAP00000016106
annotation not available
    
   0.794
ADGRD1
Adhesion G protein-coupled receptor D1.
    
   0.728
ZMYND11
Zinc finger MYND-type containing 11.
   
  
 0.704
CASK
Calcium/calmodulin dependent serine protein kinase.
    
   0.678
D2HGDH
D-2-hydroxyglutarate dehydrogenase.
    
 
 0.671
ZMYND19
Zinc finger MYND-type containing 19.
      
 0.615
HELZ
Helicase with zinc finger.
      
 0.612
ENSSDAP00000001166
annotation not available
      
 0.609
BUD31
BUD31 homolog.
      
 0.607
ENSSDAP00000004175
annotation not available
    
 
 0.600
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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