Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001136annotation not available (181 aa)    
Predicted Functional Partners:
RSPH1
Radial spoke head component 1.
   
  
 0.504
DENND2D
DENN domain containing 2D.
      
 0.497
THUMPD2
THUMP domain containing 2.
      
 0.480
SCAF4
SR-related CTD associated factor 4.
      
 0.480
ENSSDAP00000013388
annotation not available
      
 0.480
TXLNB
Taxilin beta.
      
 0.476
RSBN1
Round spermatid basic protein 1.
      
 0.463
DYNLRB2
Dynein light chain roadblock-type 2.
   
  
 0.449
STAM2
Signal transducing adaptor molecule 2.
      
 0.449
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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