Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTG1Mitochondrial ribosome associated GTPase 1. (223 aa)    
Predicted Functional Partners:
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.966
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.965
NSUN4
NOP2/Sun RNA methyltransferase 4.
  
 
 0.946
MTERF4
Mitochondrial transcription termination factor 4.
   
 
 0.942
GTPBP4
GTP binding protein 4.
   
 
 0.941
MRPS18A
Mitochondrial ribosomal protein S18A.
   
 
 0.938
MTG2
Mitochondrial ribosome associated GTPase 2.
   
 
 0.926
GTPBP8
GTP binding protein 8 (putative).
  
 
 0.925
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.921
TUFM
Tu translation elongation factor, mitochondrial.
   
 
 0.919
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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