Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF331Zinc finger protein 331. (463 aa)    
Predicted Functional Partners:
RPS16
Ribosomal protein S16.
    
 
 0.872
MRPS9
Mitochondrial ribosomal protein S9.
    
  0.831
EFHB
EF-hand domain family member B.
    
 
 0.692
EEF2
Eukaryotic translation elongation factor 2.
    
 
 0.691
ENSSDAP00000007043
annotation not available
      
 0.676
CRYBG1
Crystallin beta-gamma domain containing 1.
    
 0.667
ENSSDAP00000013283
annotation not available
    
 0.659
ENSSDAP00000009271
annotation not available
    
 
 0.634
MANBA
Mannosidase beta.
      
 0.613
ENSSDAP00000019827
annotation not available
    
 
 0.611
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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