Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001341annotation not available (256 aa)    
Predicted Functional Partners:
ACTG2
Actin gamma 2, smooth muscle.
   
  0.976
TNNT2
Troponin T2, cardiac type.
   
 0.971
TNNI3
Troponin I3, cardiac type.
   
 0.967
MYH11
Myosin heavy chain 11.
   
 0.922
ARPC2
Actin related protein 2/3 complex subunit 2.
   
 0.921
MYH10
Myosin heavy chain 10.
   
 0.920
MYL2
Myosin light chain 2.
   
 0.910
ARPC5
Actin related protein 2/3 complex subunit 5.
    
 0.908
MYL3
Myosin light chain 3.
   
 0.902
AFDN
Afadin, adherens junction formation factor.
    
 0.898
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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