Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPM3Tropomyosin 3. (223 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
   
 0.955
TNNT2
Troponin T2, cardiac type.
   
 0.952
TNNI1
Troponin I1, slow skeletal type.
   
 0.926
TNNT3
Troponin T3, fast skeletal type.
   
 0.919
TNNT1
Troponin T1, slow skeletal type.
   
 0.899
ACTC1
Actin alpha cardiac muscle 1.
   
 0.888
MYL1
Myosin light chain 1.
   
 0.880
TFG
Trafficking from ER to golgi regulator.
    
 0.848
ENSSDAP00000023395
annotation not available
   
 0.844
ENSSDAP00000025302
annotation not available
    
 0.843
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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