Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF341Zinc finger protein 341. (558 aa)    
Predicted Functional Partners:
CARMIL2
Capping protein regulator and myosin 1 linker 2.
      
 0.851
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 
 0.649
GMEB2
Glucocorticoid modulatory element binding protein 2.
    
 
 0.641
SPAG4
Sperm associated antigen 4.
    
 
 0.638
PXMP4
Peroxisomal membrane protein 4.
      
 0.632
CARMIL1
Capping protein regulator and myosin 1 linker 1.
      
 0.607
NME8
NME/NM23 family member 8.
    
 0.603
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.596
TCERG1L
Transcription elongation regulator 1 like.
    
 
 0.594
ZFAND3
Zinc finger AN1-type containing 3.
      
 0.557
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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