Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYOZ2Myozenin 2. (264 aa)    
Predicted Functional Partners:
SYNPO2L
Synaptopodin 2 like.
   
 
 0.975
ACTN4
Actinin alpha 4.
   
 
 0.972
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.966
ACTN2
Actinin alpha 2.
   
 
 0.962
MYOZ1
Myozenin 1.
   
 
 0.946
MYOZ3
Myozenin 3.
     
 0.934
ACTN1
Actinin alpha 1.
   
 
 0.933
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 
 0.933
SMYD1
SET and MYND domain containing 1.
   
 
 0.920
CASQ2
Calsequestrin 2.
   
  
 0.918
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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