Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001460annotation not available (121 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin.
    
 0.955
RPA2
Replication protein A2.
    
 0.798
CD1E
CD1e molecule.
   
    0.647
CD207
CD207 molecule.
   
  
 0.642
CD3D
CD3d molecule.
   
 
 0.636
CD83
CD83 molecule.
      
 0.613
IL4
Interleukin 4.
  
  
 0.607
CD4
CD4 molecule.
      
 0.578
CD19
CD19 molecule.
   
  
 0.567
CD2
CD2 molecule.
   
 
 0.558
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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