Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001489annotation not available (562 aa)    
Predicted Functional Partners:
ABCG5
ATP binding cassette subfamily G member 5.
   
 0.863
ABCC2
ATP binding cassette subfamily C member 2.
  
 0.806
ABCC1
ATP binding cassette subfamily C member 1.
   
 0.685
ABCC3
ATP binding cassette subfamily C member 3.
   
 0.678
ENSSDAP00000002388
annotation not available
     
  0.674
TRIP12
Thyroid hormone receptor interactor 12.
     
  0.674
ENSSDAP00000014704
annotation not available
   
 0.653
ENSSDAP00000001989
annotation not available
   
 0.635
ATP5F1D
ATP synthase F1 subunit delta.
  
   0.601
ABCG4
ATP binding cassette subfamily G member 4.
     
 0.590
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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