Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPXM1Carboxypeptidase X, M14 family member 1. (724 aa)    
Predicted Functional Partners:
TARS1
threonyl-tRNA synthetase 1.
      
 0.771
DBT
Dihydrolipoamide branched chain transacylase E2.
      
 0.764
TPD52
Tumor protein D52.
     
 0.693
LRRC1
Leucine rich repeat containing 1.
     
 0.687
POLR3H
RNA polymerase III subunit H.
    
 
 0.624
ARHGAP22
Rho GTPase activating protein 22.
     
 0.615
NYNRIN
NYN domain and retroviral integrase containing.
      
 0.613
LRRC17
Leucine rich repeat containing 17.
   
 
 0.610
GDAP1L1
Ganglioside induced differentiation associated protein 1 like 1.
      
 0.601
ENSSDAP00000019473
annotation not available
     
  0.600
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.