Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRM4Cholinergic receptor muscarinic 4. (478 aa)    
Predicted Functional Partners:
GNG2
G protein subunit gamma 2.
    
 0.970
ENSSDAP00000009410
annotation not available
    
  0.967
GNB4
G protein subunit beta 4.
    
 0.955
ENSSDAP00000014877
annotation not available
    
 0.955
ENSSDAP00000014888
annotation not available
    
 0.955
GNG4
G protein subunit gamma 4.
    
 0.954
GNB1
G protein subunit beta 1.
    
 0.953
GNB2
G protein subunit beta 2.
    
 0.934
ENSSDAP00000017957
annotation not available
    
 0.928
BDKRB1
Bradykinin receptor B1.
     
 0.920
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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