STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPLP2Ribosomal protein lateral stalk subunit P2. (113 aa)    
Predicted Functional Partners:
RPS16
Ribosomal protein S16.
   
 0.999
RPS14
Ribosomal protein S14.
   
 
 0.999
RPS11
Ribosomal protein S11.
   
 
 0.999
RPL19
Ribosomal protein L19.
   
 0.999
RPL37
Ribosomal protein L37.
   
 0.999
RPL13
Ribosomal protein L13.
   
 0.999
ENSSDAP00000007097
annotation not available
   
 
 0.999
ENSSDAP00000009333
annotation not available
   
 0.999
RPL18A
Ribosomal protein L18a.
   
 0.999
RPL27
Ribosomal protein L27.
   
 0.999
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.