Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HAPLN3Hyaluronan and proteoglycan link protein 3. (352 aa)    
Predicted Functional Partners:
RMND5B
Required for meiotic nuclear division 5 homolog B.
    
   0.826
ARMC8
Armadillo repeat containing 8.
    
   0.789
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
   0.701
N4BP3
NEDD4 binding protein 3.
    
   0.523
LYSMD2
LysM domain containing 2.
      
 0.511
FSD2
Fibronectin type III and SPRY domain containing 2.
      
 0.495
NUCB2
Nucleobindin 2.
      
 0.488
ENSSDAP00000004391
annotation not available
      
 0.483
ZSCAN2
Zinc finger and SCAN domain containing 2.
      
 0.483
TNFAIP8L3
TNF alpha induced protein 8 like 3.
      
 0.473
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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